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Q1.

Page 327

What properties distinguish enzymes from other catalysts?

Q10P

Page 359

The covalent catalytic mechanism of an enzyme depends on a single active site Cys whose pK is 8. A mutation in a nearby residue alters the microenvironment so that this pK increases to 10. Would the mutation cause the reaction rate to increase or decrease? Explain.

Q11CP

Page 339

What roles do proximity and orientation play in enzymatic catalysis?

Q11P.

Page 359

Studies at different pH鈥檚 show that an enzyme has two catalytically important residues whose pKs are ~4 and ~10. Chemical modification experiments indicate that a Glu and a Lys residue are essential for activity. Match the residues to their pKs and explain whether they are likely to act as acid or base catalysts.

Q12CP

Page 339

Why is it unlikely that nonenzymatic catalysts operate by preferentially binding the transition state?

Q12P

Page 359

Question: Explain why RNase A cannot catalyze the hydrolysis of DNA

Q13P

Page 359

Urease, the first enzyme to be crystallized, is inhibited in the presence of Hg, Cd, or Co ions. What does this information suggest about the catalytic mechanism of urease?

Q14P

Page 359

Wolfenden has stated that it is meaningless to distinguish between the 鈥渂inding sites鈥 and the 鈥渃atalytic sites鈥 of enzymes. Explain.

Q15CP

Page 344

Describe the experimental evidence that鈥檚 upports lysozyme鈥檚 catalysis by acid-base catalysis, covalent catalysis, andtransition state stabilization.

Q15 P

Page 359

Explain why lysozyme cleaves the artificial substrate NAG4~4000fourtimes more slowly than it cleavesNAG6 .

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