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The total concentration of receptors in a sample is \(10 \mathrm{mM}\). The concentration of free ligand is \(2.5 \mathrm{mM}\), and the \(K_{\mathrm{d}}\) is \(1.5 \mathrm{mM}\). Calculate the percentage of receptors that are occupied by ligand.

Short Answer

Expert verified
62.5% of the receptors are occupied by the ligand.

Step by step solution

01

Understanding the Formula

The percentage of receptors occupied by the ligand can be calculated using the equation: \(\text{Fraction Bound} = \frac{[L]}{[L] + K_d}\), where \([L]\) is the concentration of free ligand and \(K_d\) is the dissociation constant.
02

Substituting the Values

Substitute the values into the formula: \([L] = 2.5 \mathrm{mM}\) and \(K_d = 1.5 \mathrm{mM}\). The equation becomes: \(\text{Fraction Bound} = \frac{2.5}{2.5 + 1.5}\).
03

Calculating the Fraction Bound

Solve the equation: \(\text{Fraction Bound} = \frac{2.5}{4.0} = 0.625\). This means 62.5% of the receptors are occupied by the ligand.
04

Converting to Percentage

To express the fraction as a percentage, multiply the fraction by 100: \(0.625 \times 100 = 62.5\%\). This is the percentage of receptors that are occupied.

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Key Concepts

These are the key concepts you need to understand to accurately answer the question.

Fraction Bound
Fraction Bound is a key concept to understand when studying ligand-receptor interactions. It describes the proportion of receptors in a sample that have a ligand bound to them. This concept is essential for determining how effectively ligands can bind at a given ligand concentration.

To calculate the fraction bound, you can use the formula: \[\text{Fraction Bound} = \frac{[L]}{[L] + K_d}\]
  • \([L]\) represents the concentration of the free ligand — this is the quantity of ligand available to bind to the receptors.
  • \(K_d\) signifies the dissociation constant, which we'll explore in more detail later.
Using this formula, you can determine what fraction of available receptors have a ligand bound based on the equilibrium between free ligands and those in ligand-receptor complexes. This understanding is vital in fields like pharmacology, where determining interactions between drugs and their targets is crucial.
Dissociation Constant
The dissociation constant, represented as \(K_d\), is an essential parameter that describes the affinity between a ligand and a receptor. It indicates how easily a ligand-receptor complex dissociates back into the free ligand and receptor, acting inversely to binding affinity.

A low \(K_d\) value means strong binding, implying that the ligand and receptor remain together for longer, showing high affinity. Conversely, a high \(K_d\) suggests weaker binding and lower affinity.
  • The units of \(K_d\) are usually molarity (M), reflecting the concentration of ligand at which half of the available receptors are occupied.
  • Knowing \(K_d\) helps in predicting the concentration needed to achieve desired binding, which is crucial in drug design.
In our specific exercise, a \(K_d\) of \(1.5\, \text{mM}\) tells us that at \(1.5\, \text{mM}\) ligand concentration, half of the receptors would be bound. This gauge of affinity helps evaluate the effectiveness and dosage of drugs targeting specific receptors.
Receptor Occupancy
Receptor occupancy relates to the fraction of receptors that are bound by a ligand in a given biological system. It is a measurement that offers insight into the extent of receptor engagement by a ligand.

Utilizing the fraction bound, receptor occupancy can be expressed as a percentage:
  • After calculating the fraction bound (like 0.625 in our example), convert it to a percentage by multiplying by 100, resulting in a 62.5% receptor occupancy.
  • This percentage provides a visual image of receptor-ligand engagement, indicating how much of the receptor capacity is utilized.
Understanding receptor occupancy helps evaluate the efficiency of a potential drug, offering insights into its therapeutic potential. If a specific threshold of receptor occupancy correlates with a clinical effect, then achieving this level becomes crucial in dosing decisions. Monitoring the percentage of occupied receptors can thus directly impact how treatments are developed and administered.

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Most popular questions from this chapter

Pathways that lead to the activation of protein kinase B (Akt) are considered to be anti-apoptotic (apoptosis is programmed cell death). In other words, protein kinase B stimulates a cell to grow and proliferate. Like all biological events, signaling pathways that are turned on must also be turned off. A phosphatase called PTEN plays a role in removing phosphate groups from proteins, but it is highly specific for removing a phosphate group from inositol trisphosphate. If PTEN is overexpressed in mammalian cells, do these cells grow or do they undergo apoptosis?

The \(K_{\mathrm{d}}\) for a receptor-ligand interaction is \(3 \mathrm{mM}\). When the concentration of free ligand is \(18 \mathrm{mM}\) and the concentration of free receptor is \(5 \mathrm{mM}\), what is the concentration of receptor that is occupied by ligand?

The total concentration of receptors in a sample is \(20 \mathrm{mM}\). The concentration of free ligand is \(5 \mathrm{mM}\), and the \(K_{\mathrm{d}}\) is \(10 \mathrm{mM}\). Calculate the percentage of receptors that are occupied by ligand.

a. Draw the reaction that shows the protein kinase A-catalyzed phosphorylation of a threonine residue on a target protein. b. Draw the reaction that shows the phosphatase-catalyzed hydrolysis of the phosphorylated threonine. c. Some bacterial signaling systems involve kinases that transfer a phosphoryl group to a His side chain. Draw the structure of the phospho-His side chain.

Stimulation of the insulin receptor by ligand binding and autophosphorylation eventually leads to the activation of both protein kinase B (Akt) and protein kinase C. Protein kinase B phosphorylates glycogen synthase kinase 3 (GSK3) and inactivates it. (Active GSK3 inactivates glycogen synthase by phosphorylating it.) Glycogen synthase catalyzes synthesis of glycogen from glucose. In the presence of insulin, GSK3 is inactivated, so glycogen synthase is not phosphorylated and is active. Protein kinase \(\mathrm{C}\) stimulates the translocation of glucose transporters to the plasma membrane by a mechanism not currently understood. One strategy for treating diabetes is to develop drugs that act as inhibitors of the phosphatases that remove phosphate groups from the phosphorylated tyrosines on the insulin receptor. Why might this be an effective treatment for diabetes?

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