Chapter 18: Problem 19
The hemoglobin B gene ( \(H b\) ) has a common allele \((A)\) of an \(\operatorname{SNP}(r s 334)\) that encodes the \(H b^{A}\) form of (adult) hemoglobin and a rare allele ( \(T\) ) that encodes the sickling form of hemoglobin, \(H b^{S}\). Among 57 members of the Yoruba tribe of Nigeria, 44 were \(A / A\) and 13 were \(A / T .\) No \(T / T\) individuals were observed. Use the \(\chi^{2}\) test to determine whether these observed genotypic frequencies fit Hardy-Weinberg expectations.
Short Answer
Step by step solution
Determine Observed Genotype Frequencies
Determine the Total Number of Alleles
Calculate Allele Frequencies
Calculate Expected Genotype Frequencies under Hardy-Weinberg Equilibrium
Perform Chi-Square Test
Compare with Critical Value
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Key Concepts
These are the key concepts you need to understand to accurately answer the question.
Chi-Square Test
The formula for calculating the chi-square statistic is:
- \[ \chi^2 = \sum \frac{(O_i - E_i)^2}{E_i}\]
- \(O_i\) represents the observed frequency of a genotype.
- \(E_i\) represents the expected frequency of a genotype under Hardy-Weinberg.
A high chi-square value suggests that the observed frequencies significantly differ from expectations, indicating other evolutionary influences on allele frequencies or genetic drift. A low chi-square value leads to a failure to reject the null hypothesis, suggesting the population is in Hardy-Weinberg Equilibrium.
Allele Frequencies
To calculate allele frequencies:
- Count the total number of individuals and multiply by 2 since each carries two alleles.
- For allele \(A\), count all \(A/A\) individuals twice and \(A/T\) individuals once. Add these to get the total \(A\) alleles. Then divide by the total number of alleles.
- Do the same for allele \(T\), considering its presence in \(A/T\) individuals.
- Total \(A\) alleles count as 101, leading to an \(A\) frequency of \(0.886\).
- Total \(T\) alleles count as 13, resulting in a \(T\) frequency of \(0.114\).
Genotype Frequencies
In Hardy-Weinberg Equilibrium, genotype frequencies are derived from allele frequencies with no evolutionary influences like selection, mutation, or migration. The formulae are:
- \(p^2\): frequency of homozygous dominant genotypes (e.g., \(A/A\))
- \(2pq\): frequency of heterozygous genotypes (e.g., \(A/T\))
- \(q^2\): frequency of homozygous recessive genotypes (e.g., \(T/T\))
In the given population:
- The expected frequency of \(A/A\) is \(0.785\).
- The expected frequency of \(A/T\) is \(0.202\).
- The expected frequency of \(T/T\) is \(0.013\).