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Stomach Bacteria and Irritable Bowel Syndrome Studies are finding that bacteria in the stomach are essential for healthy functioning of the human body. One study \(^{68}\) compared the number of unique bacterial genes in stomachs of healthy patients and those of patients with irritable bowel syndrome (IBS). For healthy patients, we have \(\bar{x}=564\) million with \(s=122\) million and \(n=99\). For those with IBS, we have \(\bar{x}=425\) million with \(s=127\) million and \(n=25 .\) Both distributions appear to be approximately normally distributed. Test to see if people with IBS have, on average, significantly fewer unique bacterial genes in their stomachs. Show all details, including giving the degrees of freedom used.

Short Answer

Expert verified
Based on the analysis, it is concluded that people with IBS have significantly fewer unique bacterial genes in their stomachs. The t statistic of 5.17 is greater than the critical t-value for 122 degrees of freedom.

Step by step solution

01

Calculate the standard errors and degrees of freedom

The standard error for each group is calculated based on the standard deviation and the square root of the sample size. For the healthy patients, the standard error (SE1) is \(s1/ \sqrt{n1} = 122 / \sqrt{99} = 12.28\) million. For the IBS patients, the standard error (SE2) is \(s2 / \sqrt{n2} = 127 / \sqrt{25} = 25.4\) million. The degrees of freedom (df) is calculated using the formula \(df = n1 + n2 - 2 = 99 + 25 - 2 = 122\).
02

Calculate the t-statistic

The t-statistic is calculated by subtracting the averages of the two groups and then dividing by the pooled standard error. This is given by the formula \[ t = (\bar{x1} - \bar{x2}) / \sqrt{ SE1^2 + SE2^2 } = (564 - 425) / \sqrt{12.28^2 + 25.4^2} = 5.17 \].
03

Test the null hypothesis

We test the null hypothesis that there is no significant difference between the means of the two populations by comparing the calculated t-statistic with the critical t-value corresponding to the degrees of freedom. Using a significance level of 0.05, the two-tailed critical t-value for 122 df is approximately 1.98. Since our calculated t-statistic (5.17) is greater than the critical value, we reject the null hypothesis.

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Key Concepts

These are the key concepts you need to understand to accurately answer the question.

Normal Distribution
Understanding the normal distribution is fundamental in hypothesis testing. It's a type of continuous probability distribution that appears throughout statistics. A normal distribution is symmetrical and has a bell-shaped curve, where most occurrences take place around the mean, and probabilities for values decrease as they move away from the mean.

In the context of our exercise involving stomach bacteria, the number of unique bacterial genes in both healthy patients and those with IBS is assumed to be normally distributed. This assumption is crucial because it allows the use of parametric tests, such as the t-test, which can provide more precise results under this condition.

When data is normally distributed, it adheres to the empirical rule: about 68% of the data falls within one standard deviation of the mean, 95% within two standard deviations, and 99.7% within three. In research and hypothesis testing, the normal distribution is often used to make inferences about entire populations based on sample data, which is exactly what's done when testing if people with IBS have fewer bacterial genes.
Standard Error
The standard error (SE) measures the accuracy with which a sample represents a population. In hypothesis testing, the standard error is vital as it provides an estimate of the variance in sample means. It essentially tells us how far the sample mean is likely to be from the actual population mean.

In our exercise, we computed the standard error for the number of unique bacterial genes in both healthy patients and IBS patients. This was done by dividing the standard deviation by the square root of the sample size. The smaller the standard error, the more reliable is our sample mean as an estimate of the population mean. It's important to note that the standard error decreases as the sample size increases, which is a reflection of the law of large numbers.

Knowing the standard error for both groups allows us to move forward in our hypothesis test and calculate the t-statistic, which will help us understand how significant the difference between the two groups is.
T-Statistic
The t-statistic is a type of statistic that you calculate when you want to compare the means of two groups. When dealing with small sample sizes or unknown population variances, the t-statistic comes into play, as opposed to the z-score that's used for large sample sizes and known variances.

To obtain the t-statistic in our exercise, we subtracted the mean of the patients with IBS from the mean of the healthy patients and divided this difference by the pooled standard error. This t-statistic represents how many standard errors away from the null hypothesis our observed difference is.

The significance of the t-statistic is evaluated in comparison to a critical value obtained from a t-distribution table, which changes depending on the degrees of freedom and the chosen significance level. If the calculated t-statistic is beyond this critical value, it suggests a statistically significant difference between the groups.
Degrees of Freedom
The concept of degrees of freedom (df) plays a critical role in statistics, especially in hypothesis testing. It refers to the number of independent values or quantities that can vary in an analysis without breaking any constraints.

In our problem, the degrees of freedom were calculated for the t-test. We took the total number of subjects from both groups and subtracted 2 (the number of group means). The degrees of freedom determine the shape of the t-distribution, which is used to find the critical t-value. The closer the degrees of freedom get to infinity, the closer the t-distribution looks like the standard normal distribution.

It's important to use the correct degrees of freedom when consulting the t-distribution table, as it ensures the accuracy of our hypothesis testing conclusions. In this exercise, our degrees of freedom help us to decide whether to reject the null hypothesis, ultimately aiding us to infer if there is a significant difference between healthy subjects and those with IBS regarding the number of unique bacterial genes.

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Most popular questions from this chapter

Involve scores from the high school graduating class of 2010 on the SAT (Scholastic Aptitude Test). The distribution of sample means \(\bar{x}_{N}-\bar{x}_{E},\) where \(\bar{x}_{N}\) represents the mean Mathematics score for a sample of 100 people for whom the native language is not English and \(\bar{x}_{E}\) represents the mean Mathematics score for a sample of 100 people whose native language is English, is centered at 10 with a standard deviation of 17.41 . Give notation and define the quantity we are estimating with these sample differences. In the population of all students taking the test, who scored higher on average, non-native English speakers or native English speakers? Standard Error from a Formula and a Bootstrap Distribution In Exercises 6.224 and \(6.225,\) use StatKey or other technology to generate a bootstrap distribution of sample differences in means and find the standard error for that distribution. Compare the result to the standard error given by the Central Limit Theorem, using the sample standard deviations as estimates of the population standard deviations.

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