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There are many techniques for investigating human genomic disorders. Western blotting looks for protein, Eastern blotting looks for post-translational changes, Northern blotting looks at mRNA, and Southern blotting looks at DNA. If you were to look at sickle cell anemia, a disorder affecting hemoglobin produced in red blood cells, which technique would be the most useful in detecting polymorphism in a sample? a. Northern blotting b. Southern blotting c. Western blotting d. Eastern blotting

Short Answer

Expert verified
b. Southern blotting

Step by step solution

01

- Understand the Disorder

Sickle cell anemia is a genetic disorder that affects hemoglobin, which is produced in red blood cells.
02

- Identify Types of Blotting Techniques

Review the various blotting techniques: Western blotting looks for proteins; Eastern blotting looks for post-translational changes; Northern blotting looks at mRNA; Southern blotting looks at DNA.
03

- Determine What Needs to Be Detected

Sickle cell anemia is caused by a mutation in the DNA that codes for the hemoglobin protein. Therefore, identifying polymorphism in the DNA is essential.
04

- Select the Appropriate Technique

The most useful technique for detecting DNA polymorphism in the sample from a patient with sickle cell anemia is Southern blotting because it directly assesses DNA changes.

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Key Concepts

These are the key concepts you need to understand to accurately answer the question.

sickle cell anemia
Sickle cell anemia is a genetic disorder that directly affects the hemoglobin in our red blood cells.
Hemoglobin is the protein responsible for carrying oxygen throughout our body.
In individuals with sickle cell anemia, the hemoglobin protein is mutated, causing the red blood cells to become crescent-shaped or 'sickle' shaped.
These abnormally shaped blood cells can block blood flow and break down easily, leading to various health issues.
Some common symptoms of sickle cell anemia include pain, frequent infections, and anemia.
To understand the origin of these symptoms, it's important to identify the genetic mutation causing them.
This leads us to the concept of DNA polymorphism which is key in detecting such mutations.
Southern blotting
Southern blotting is a laboratory method used to detect specific DNA sequences in DNA samples.
Named after its inventor, Edwin Southern, this technique helps to identify DNA polymorphisms.
Here’s how it works:
  • First, the DNA is extracted from cells and cut into fragments using restriction enzymes.
  • Next, these DNA fragments are separated by size through a process called gel electrophoresis.
  • The separated fragments are then transferred to a membrane, creating a 'blot'.
  • A labeled DNA probe that is complementary to the sequence of interest is then added to the membrane.
  • The probe binds to the specific DNA fragment, and visual methods are used to detect these bound probes.
Since sickle cell anemia results from a specific mutation in the DNA sequence of the hemoglobin gene, Southern blotting is effective for detecting this mutation.
This makes Southern blotting the most appropriate technique for identifying genetic disorders like sickle cell anemia that involve DNA polymorphisms.
DNA polymorphism
DNA polymorphism refers to variations in the DNA sequence among individuals within a population.
These variations can affect genes and the proteins they encode, potentially leading to genetic disorders.
There are different types of DNA polymorphisms:
  • Single nucleotide polymorphisms (SNPs) - A single base-pair change in the DNA sequence.
  • Insertion-deletion polymorphisms (Indels) - Addition or removal of small DNA fragments.
  • Copy number variations (CNVs) - Variations in the number of copies of a particular gene.
In the context of sickle cell anemia, a specific SNP leads to a change in the hemoglobin gene.
This single nucleotide change from A to T results in the substitution of the amino acid valine for glutamic acid in the hemoglobin protein, causing its malfunction.
Detecting such DNA polymorphisms is crucial for diagnosing genetic disorders, making methods like Southern blotting invaluable in genetic research and clinical diagnostics.

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Most popular questions from this chapter

Genetic engineering can be applied to heritable information to produce what is referred to as a "knockdown organism." Biotechnology also can be applied to produce nonheritable changes in a "knockdown gene." Post-transcriptional strategies target the mRNA product of a gene. One such strategy uses the conserved genes that encode RNA interference (RNAi) proteins for the regulation of levels of mRNA transcription. Some viral RNA is double stranded (dsRNA). A cell responds to the presence of double-stranded RNA by the attachment of the enzyme DICER, which cuts dsRNA into short fragments. One strand of the fragment is transferred to the RNA-induced silencing complex (RISC), which searches for an mRNA with a sequence matching that of the fragment strand. When detected, this mRNA is degraded. A. Common in cancer cells is a mutation of the gene that encodes the protein p53, whose role is to detect and repair errors in DNA; if repairs cannot be made, p53 initiates apoptosis. Create a visual representation to explain how the DICER-RISC system within the cell can be used to suppress the translation of a mutated form of the gene encoding p53, potentially destroying a tumor. B. Whole-genome sequences provide a library of potentially expressed proteins, but they do not provide information on the functions of each protein. In an approach called reverse genetics, investigations attempt to determine the function of the gene, often by silencing the gene using RNAi technology. Assume that you have the ability to synthesize dsRNA from a DNA segment taken from an organism whose whole genome has been determined. Design a plan for collecting data that could be used to assign a function to the protein encoded by this sequence. (Hint: Don’t worry about the number of experiments that might need to be conducted to implement your plan. An automated technique called high-throughput screening robotically supports thousands of simultaneous experiments.)

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